Higher Degree by Research Application Portal

Are you passionate about horticulture and with to contribute to a vibrant industry future? We are seeking a PhD candidate to expand the knowledge of the genetic control of key phenology and quality traits in appple.

The Australian National Apple Breeding program (ANABP) is a leader in the development and release of commercially successful apple varieties. Traditionally, apple breeding has been a time-consuming and resource-intensive process, spanning several decades from initial cross-pollination to commercial availability. However, with advancements in high-throughput genomics, phenomics, and data analytics, a paradigm shift is occurring globally. Modern breeding has now evolved into a highly advanced, multi-disciplinary science that is data-driven and predictive in nature. Therefore, in ANABP there are scopes in the development and deployment of marker assisted selection strategies; development, and improvement of genomic selection models for a range of traits, and confidence in prediction accuracy for informed selection targeting future environments.

This project will aim at exploring the genomic variation of the ANABP accessions and developing a more streamlined phenotyping platform for traits of interest targeting  improved genotype-phenotype matching. Despite having been used regularly in crossing programs, most of the ANABP accessions were not genotyped before. The student will use the high-density apple genotyping array to genotype these accessions. A subset of these accessions has been characterised in Canadian and USA environments. Precise phenotyping under Australian environments will enable the student to identify key loci underpinning trait expression and to evaluate the utility of different genomic prediction models.  

Must have H1A or equivalent postgraduate thesis degree. Must meet English language requirements for enrolment. 

Required selection criteria:

Experience gathering, managing sample identity and data.

Familiarity with genomic data, handling, analysis and presentation.

Experience/qualification in plant science, breeding, genomics or molecular genetic methods.

Sound understanding of plant development and genetics.

Strong verbal and written communication skills.

Understanding of WHS requirements and practices.

Ability to travel intra-state for extended periods of research placement.

Desirable criteria:

Genomic and bioinformatic techniques.

Interest in horticulture

Familiarity with statistical methods used in a research context

Adaptable to varied work places (field trials, process laboratory, office, research laboratory, academic institutions).

Submit your cv, together with your postgraduate certificate (showing grades) and a 300 word statement against the selection criteria. Submit your application as soon as possible (do not wait for the end date) to A/Prof Michael Considine <michael.considine@uwa.edu.au>

<michael.considine@uwa.edu.au>